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In order to realize the cross domain storage and scheduling of high-speed target data, and solve the practical application problems related to target node detection, a high-speed target detection system with programmable remote sensing data dynamic acquisition is designed. At the same time, the physical equipment layer, data aggregation layer and application interface layer are connected to complete the application framework of target detection system under the dynamic acquisition of programmable remote sensing data. Using mongodb database architecture and MySQL database table, the necessary target data storage model is established to realize the directional connection of airport high-speed target data storage module. The real value of the maximum detection distance is calculated. According to the design principle of the target detection parameters, the application expression related to the pulse function is defined to realize the analysis and processing of the high-speed target signal source to be detected, and the design of the high-speed target detection system under the dynamic acquisition of programmable remote sensing data is completed. The experimental results show that the cross domain scheduling rate of stored target data in the programmable remote sensing detection system can reach 10.0 × 107t / s, and the minimum information storage value per unit time is close to 4.2 × 107t. It can not only solve the application problem of related node detection, but also realize the reasonable storage and scheduling of high-speed aerial target data.